gov.usda.gdpc
Class AbstractGenotypeExperimentGroup

java.lang.Object
  gov.usda.gdpc.AbstractGroup
      gov.usda.gdpc.AbstractDBElementGroup
          gov.usda.gdpc.AbstractGenotypeExperimentGroup

All Implemented Interfaces:

java.util.Collection, DBElementGroup, GenotypeExperimentGroup, Group, java.util.List

Direct Known Subclasses:

DefaultGenotypeExperimentGroup

public abstract class AbstractGenotypeExperimentGroup

extends AbstractDBElementGroup

implements GenotypeExperimentGroup

This class provides a skeletal implementation of the GenotypeExperimentGroup interface to minimize the effort required to implement this interface.

Author:

terryc

Field Summary

Fields inherited from class gov.usda.gdpc.AbstractDBElementGroup

myIndex

Constructor Summary

AbstractGenotypeExperimentGroup()
AbstractGenotypeExperimentGroup constructor.

AbstractGenotypeExperimentGroup(GenotypeExperiment[] experiments)
AbstractGenotypeExperimentGroup constructor.

AbstractGenotypeExperimentGroup(GenotypeExperimentGroup[] groups)
AbstractGenotypeExperimentGroup constructor.

AbstractGenotypeExperimentGroup(java.util.List list)
AbstractGenotypeExperimentGroup constructor.

Method Summary

GenotypeExperiment	getGenotypeExperiment(java.lang.String dataSource, Identifier id) This returns the genotype experiment instance from this group that matches the specified id and source.
GenotypeExperimentGroup	getGenotypeExperimentGroup(GenotypeExperimentFilter filter) Get the genotype experiment group matching the given filter from this genotype experiment group.
java.lang.String	getType() Get type of this group.

Methods inherited from class gov.usda.gdpc.AbstractDBElementGroup

getDBElementGroup, getDBElements, getDefinedProperties, getDistinctProperties, index, toString

Methods inherited from class gov.usda.gdpc.AbstractGroup

add, add, addAll, addAll, clear, contains, containsAll, get, indexOf, isEmpty, iterator, lastIndexOf, listIterator, listIterator, remove, remove, removeAll, retainAll, set, size, subList, toArray, toArray

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface gov.usda.gdpc.DBElementGroup

getDBElements, getDefinedProperties, getDistinctProperties, index

Methods inherited from interface java.util.List

add, add, addAll, addAll, clear, contains, containsAll, equals, get, hashCode, indexOf, isEmpty, iterator, lastIndexOf, listIterator, listIterator, remove, remove, removeAll, retainAll, set, size, subList, toArray, toArray

Constructor Detail

AbstractGenotypeExperimentGroup

public AbstractGenotypeExperimentGroup(GenotypeExperiment[] experiments)

AbstractGenotypeExperimentGroup constructor.

Parameters:

experiments - list of genotype experiments to be a part of this group.

AbstractGenotypeExperimentGroup

public AbstractGenotypeExperimentGroup()

AbstractGenotypeExperimentGroup constructor. Creates an empty group.

AbstractGenotypeExperimentGroup

public AbstractGenotypeExperimentGroup(java.util.List list)

AbstractGenotypeExperimentGroup constructor.

Parameters:

list - list of objects to be a part of this group. Any null in the list will be discarded.

AbstractGenotypeExperimentGroup

public AbstractGenotypeExperimentGroup(GenotypeExperimentGroup[] groups)

AbstractGenotypeExperimentGroup constructor.

Parameters:

groups - groups to include in this new group.

Method Detail

getGenotypeExperimentGroup

public GenotypeExperimentGroup getGenotypeExperimentGroup(GenotypeExperimentFilter filter)

Get the genotype experiment group matching the given filter from this genotype experiment group.

Specified by:

getGenotypeExperimentGroup in interface GenotypeExperimentGroup

Parameters:

filter - filter

Returns:

genotype experiment group

getGenotypeExperiment

public GenotypeExperiment getGenotypeExperiment(java.lang.String dataSource,
                                                Identifier id)

This returns the genotype experiment instance from this group that matches the specified id and source. Null will be returned if its not in this group.

Specified by:

getGenotypeExperiment in interface GenotypeExperimentGroup

Parameters:

dataSource - data source

id - identifier

Returns:

genotype experiment or null if not in this group.

getType

public java.lang.String getType()

Get type of this group.

Specified by:

getType in interface DBElementGroup

Returns:

type