gov.usda.gdpc
Class DefaultGenotypeGroup

java.lang.Object
  gov.usda.gdpc.AbstractGroup
      gov.usda.gdpc.AbstractDBElementGroup
          gov.usda.gdpc.AbstractGenotypeGroup
              gov.usda.gdpc.DefaultGenotypeGroup

All Implemented Interfaces:

java.util.Collection, DBElementGroup, GenotypeGroup, Group, java.util.List

public final class DefaultGenotypeGroup

extends AbstractGenotypeGroup

This is the default implementation of a genotype group. Most of the function comes from the abstract class that is extends.

Author:

terryc

Field Summary

Fields inherited from class gov.usda.gdpc.AbstractDBElementGroup

myIndex

Constructor Summary

DefaultGenotypeGroup()
DefaultGenotypeGroup constructor.

Method Summary

static DefaultGenotypeGroup	getInstance(Genotype[] genotypes) Factory method to create instances of DefaultGenotypeGroup.
static DefaultGenotypeGroup	getInstance(GenotypeExperimentGroup experimentGroup, TaxonGroup taxonGroup, java.lang.Object[][] data) DefaultGenotypeGroup constructor.
static DefaultGenotypeGroup	getInstance(GenotypeGroup[] groups) Factory method to create instances of DefaultGenotypeGroup.
static DefaultGenotypeGroup	getInstance(java.util.List list) Factory method to create instances of DefaultGenotypeGroup.

Methods inherited from class gov.usda.gdpc.AbstractGenotypeGroup

getGenotype, getGenotypeExperimentGroup, getGenotypeGroup, getTaxonGroup, getType, numGenotypeExperiments, numTaxa

Methods inherited from class gov.usda.gdpc.AbstractDBElementGroup

getDBElementGroup, getDBElements, getDefinedProperties, getDistinctProperties, index, toString

Methods inherited from class gov.usda.gdpc.AbstractGroup

add, add, addAll, addAll, clear, contains, containsAll, get, indexOf, isEmpty, iterator, lastIndexOf, listIterator, listIterator, remove, remove, removeAll, retainAll, set, size, subList, toArray, toArray

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface gov.usda.gdpc.DBElementGroup

getDBElements, getDefinedProperties, getDistinctProperties, index

Methods inherited from interface java.util.List

add, add, addAll, addAll, clear, contains, containsAll, equals, get, hashCode, indexOf, isEmpty, iterator, lastIndexOf, listIterator, listIterator, remove, remove, removeAll, retainAll, set, size, subList, toArray, toArray

Constructor Detail

DefaultGenotypeGroup

public DefaultGenotypeGroup()

DefaultGenotypeGroup constructor. Creates an empty group.

Method Detail

getInstance

public static DefaultGenotypeGroup getInstance(Genotype[] genotypes)

Factory method to create instances of DefaultGenotypeGroup.

Parameters:

genotypes - list of genotypes to be a part of this group.

Returns:

default genotype group

getInstance

public static DefaultGenotypeGroup getInstance(java.util.List list)

Factory method to create instances of DefaultGenotypeGroup.

Parameters:

list - list of objects to be a part of this group. Any null in the list will be discarded.

Returns:

default genotype group

getInstance

public static DefaultGenotypeGroup getInstance(GenotypeGroup[] groups)

Factory method to create instances of DefaultGenotypeGroup.

Parameters:

groups - groups to include in this new group.

Returns:

default genotype group

getInstance

public static DefaultGenotypeGroup getInstance(GenotypeExperimentGroup experimentGroup,
                                               TaxonGroup taxonGroup,
                                               java.lang.Object[][] data)

DefaultGenotypeGroup constructor.