gov.usda.gdpc
Class LocusProperty

java.lang.Object
  gov.usda.gdpc.AbstractProperty
      gov.usda.gdpc.LocusProperty

All Implemented Interfaces:

java.lang.Comparable, Property

public class LocusProperty

extends AbstractProperty

This follows the enum pattern and represents a locus property. This is used to define the specific properties of a locus.

Author:

terryc

Field Summary

static LocusProperty	CHROMOSOME_NUMBER Chromosome where locus exist (data type: java.lang.Integer).
static LocusProperty	COMMENTS Comments about locus (data type: java.lang.String).
static LocusProperty	DATA_SOURCE Data source of locus (data type: java.lang.String).
static LocusProperty	GENETIC_BIN Genetic bin of locus (data type: java.lang.String).
static LocusProperty	GENETIC_MAP Genetic map of locus (data type: java.lang.String).
static LocusProperty	GENETIC_POSITION Genetic position of locus (data type: java.lang.Double).
static LocusProperty	ID ID of locus (data type: gov.usda.gdpc.Identifier).
static LocusProperty	LOCUS_TYPE Type of locus (data type: java.lang.String).
static LocusProperty	NAME Name of locus (data type: java.lang.String).
static LocusProperty	PHYSICAL_POSITION Physical position of locus (data type: java.lang.String).
static java.lang.String	PROPERTY_TYPE The property type.

Constructor Summary

LocusProperty(java.lang.String name, java.lang.Class dataType, java.lang.String propertyType, java.lang.String propertySubType)
LocusProperty constructor.

LocusProperty(java.lang.String name, java.lang.String dataType, java.lang.String propertyType, java.lang.String propertySubType)
LocusProperty constructor.

Method Summary

static LocusProperty[]	getDefinedProperties()
static LocusProperty	getInstance(java.lang.String propertySubType)

Methods inherited from class gov.usda.gdpc.AbstractProperty

compareTo, equals, getDataType, getName, getSubType, getType, hashCode, toString

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

PROPERTY_TYPE

public static final java.lang.String PROPERTY_TYPE

The property type.

See Also:

Constant Field Values

ID

public static final LocusProperty ID

ID of locus (data type: gov.usda.gdpc.Identifier).

DATA_SOURCE

public static final LocusProperty DATA_SOURCE

Data source of locus (data type: java.lang.String).

NAME

public static final LocusProperty NAME

Name of locus (data type: java.lang.String).

LOCUS_TYPE

public static final LocusProperty LOCUS_TYPE

Type of locus (data type: java.lang.String).

CHROMOSOME_NUMBER

public static final LocusProperty CHROMOSOME_NUMBER

Chromosome where locus exist (data type: java.lang.Integer).

GENETIC_POSITION

public static final LocusProperty GENETIC_POSITION

Genetic position of locus (data type: java.lang.Double).

GENETIC_BIN

public static final LocusProperty GENETIC_BIN

Genetic bin of locus (data type: java.lang.String).

PHYSICAL_POSITION

public static final LocusProperty PHYSICAL_POSITION

Physical position of locus (data type: java.lang.String).

GENETIC_MAP

public static final LocusProperty GENETIC_MAP

Genetic map of locus (data type: java.lang.String).

COMMENTS

public static final LocusProperty COMMENTS

Comments about locus (data type: java.lang.String).

Constructor Detail

LocusProperty

public LocusProperty(java.lang.String name,
                     java.lang.String dataType,
                     java.lang.String propertyType,
                     java.lang.String propertySubType)

LocusProperty constructor.

Parameters:

name - locus property name

dataType - data type of this property (class name)

propertyType - property type

propertySubType - property subtype

LocusProperty

public LocusProperty(java.lang.String name,
                     java.lang.Class dataType,
                     java.lang.String propertyType,
                     java.lang.String propertySubType)

LocusProperty constructor.

Parameters:

name - locus property name

dataType - data type of this property (class)

propertyType - property type

propertySubType - property subtype

Method Detail

getInstance

public static LocusProperty getInstance(java.lang.String propertySubType)

getDefinedProperties

public static LocusProperty[] getDefinedProperties()