Uses of Interface
gov.usda.gdpc.EnvironmentExperimentGroup

Packages that use EnvironmentExperimentGroup

gov.usda.gdpc	This is the main package for The Genomic Diversity and Phenotype Connection (GDPC).
gov.usda.gdpc.axis	This package provides the code to allow GDPC to work with the SOAP Engine AXIS.
gov.usda.gdpc.panzea	This package provides a specific connection to the panzea database which is maintained by NCSU.

Uses of EnvironmentExperimentGroup in gov.usda.gdpc

Classes in gov.usda.gdpc that implement EnvironmentExperimentGroup

class	AbstractEnvironmentExperimentGroup This class provides a skeletal implementation of the EnvironmentExperimentGroup interface to minimize the effort required to implement this interface.
class	DefaultEnvironmentExperimentGroup This is the default implementation of a environment experiment group.

Methods in gov.usda.gdpc that return EnvironmentExperimentGroup

EnvironmentExperimentGroup	PhenotypeTable.getEnvironmentExperimentGroup() Get the environment experiment group for this table.
EnvironmentExperimentGroup	PhenotypeGroup.getEnvironmentExperimentGroup() Returns the group of environment experiments associated with this group of phenotypes.
EnvironmentExperimentGroup	EnvironmentExperimentGroup.getEnvironmentExperimentGroup(EnvironmentExperimentFilter filter) Get the environment experiment group matching the given filter from this environment experiment group.
EnvironmentExperimentGroup	DBGateway.getEnvironmentExperimentGroup(EnvironmentExperimentFilter filter) Gets an environment experiment group based on the given environment experiment filter.
EnvironmentExperimentGroup	DBConnection.getEnvironmentExperimentGroup(EnvironmentExperimentFilter filter) Gets an environment experiment group based on the given environment experiment filter.
EnvironmentExperimentGroup	AbstractPhenotypeGroup.getEnvironmentExperimentGroup() Returns the group of environment experiments associated with this group of phenotypes.
EnvironmentExperimentGroup	AbstractEnvironmentExperimentGroup.getEnvironmentExperimentGroup(EnvironmentExperimentFilter filter) Get the environment experiment group matching the given filter from this environment experiment group.
EnvironmentExperimentGroup	AbstractDBGateway.getEnvironmentExperimentGroup(EnvironmentExperimentFilter filter) Gets an environment experiment group based on the given environment experiment filter.
EnvironmentExperimentGroup	AbstractDBConnection.getEnvironmentExperimentGroup(EnvironmentExperimentFilter filter) This method is unsupported by this class.

Methods in gov.usda.gdpc with parameters of type EnvironmentExperimentGroup

PhenotypeGroup	DBGateway.getPhenotypeGroup(EnvironmentExperimentGroup experimentGroup, TaxonGroup taxonGroup, PhenotypeOntologyGroup ontologyGroup) Gets the phenotypes for all combinations of environment experiments, taxa, and phenotype ontologys defined by the respective groups.
PhenotypeGroup	DBConnection.getPhenotypeGroup(EnvironmentExperimentGroup experimentGroup, TaxonGroup taxonGroup, PhenotypeOntologyGroup ontologyGroup) Gets the phenotypes for all combinations of environment experiments, taxa, and phenotype ontologys defined by the respective groups.
PhenotypeGroup	AbstractDBGateway.getPhenotypeGroup(EnvironmentExperimentGroup experimentGroup, TaxonGroup taxonGroup, PhenotypeOntologyGroup ontologyGroup) Gets the phenotypes for all combinations of environment experiments, taxa, and phenotype ontologys defined by the respective groups.
PhenotypeGroup	AbstractDBConnection.getPhenotypeGroup(EnvironmentExperimentGroup experimentGroup, TaxonGroup taxonGroup, PhenotypeOntologyGroup ontologyGroup) This method is unsupported by this class.

Constructors in gov.usda.gdpc with parameters of type EnvironmentExperimentGroup

DefaultEnvironmentExperimentGroup(EnvironmentExperimentGroup[] groups)
DefaultEnvironmentExperimentGroup constructor.

AbstractEnvironmentExperimentGroup(EnvironmentExperimentGroup[] groups)
AbstractEnvironmentExperimentGroup constructor.

Uses of EnvironmentExperimentGroup in gov.usda.gdpc.axis

Methods in gov.usda.gdpc.axis that return EnvironmentExperimentGroup

EnvironmentExperimentGroup

DBConnectionProxy.getEnvironmentExperimentGroup(EnvironmentExperimentFilter filter) Gets an environment experiment group based on the given environment experiment filter.

Methods in gov.usda.gdpc.axis with parameters of type EnvironmentExperimentGroup

PhenotypeGroup

DBConnectionProxy.getPhenotypeGroup(EnvironmentExperimentGroup experimentGroup, TaxonGroup taxonGroup, PhenotypeOntologyGroup ontologyGroup) Gets the phenotypes for all combinations of environment experiments, taxa, and phenotype ontologys defined by the respective groups.

Uses of EnvironmentExperimentGroup in gov.usda.gdpc.panzea

Fields in gov.usda.gdpc.panzea declared as EnvironmentExperimentGroup

EnvironmentExperimentGroup

PanzeaCache.ENVIRONMENT_EXPERIMENTS

Methods in gov.usda.gdpc.panzea that return EnvironmentExperimentGroup

EnvironmentExperimentGroup

PanzeaDBConnection.getEnvironmentExperimentGroup(EnvironmentExperimentFilter filter) Gets an environment experiment group based on the given environment experiment filter.

Methods in gov.usda.gdpc.panzea with parameters of type EnvironmentExperimentGroup

PhenotypeGroup

PanzeaDBConnection.getPhenotypeGroup(EnvironmentExperimentGroup experimentGroup, TaxonGroup taxonGroup, PhenotypeOntologyGroup ontologyGroup) Gets the phenotypes for all combinations of environment experiments, taxa, and phenotype ontologys defined by the respective groups.