Hierarchy For All Packages

Package Hierarchies:

gov.usda.gdpc, gov.usda.gdpc.axis, gov.usda.gdpc.browser, gov.usda.gdpc.database, gov.usda.gdpc.gramene, gov.usda.gdpc.gui, gov.usda.gdpc.gui.dbetree, gov.usda.gdpc.pal, gov.usda.gdpc.panzea, gov.usda.gdpc.util, gov.usda.gdpc.xml

Class Hierarchy

• class java.lang.Object
  • class javax.swing.AbstractAction (implements javax.swing.Action, java.lang.Cloneable, java.io.Serializable)
    • class gov.usda.gdpc.browser.AboutAction
    • class gov.usda.gdpc.browser.AddDBConnectionAction (implements java.lang.Runnable)
    • class gov.usda.gdpc.browser.AddSOAPConnectionAction (implements java.lang.Runnable)
    • class gov.usda.gdpc.browser.DeselectAction
    • class gov.usda.gdpc.browser.DoubleArrowAction (implements java.lang.Runnable)
    • class gov.usda.gdpc.browser.ExitAction
    • class gov.usda.gdpc.browser.GetStartedAction
    • class gov.usda.gdpc.browser.HelpAction
    • class gov.usda.gdpc.browser.RemoveAllFromTreeAction (implements java.lang.Runnable)
    • class gov.usda.gdpc.browser.RemoveDBConnectionAction
    • class gov.usda.gdpc.browser.RemoveFromTreeAction (implements java.lang.Runnable)
    • class gov.usda.gdpc.browser.RightArrowAction (implements java.lang.Runnable)
    • class gov.usda.gdpc.browser.UpdateAction
  • class java.util.AbstractCollection (implements java.util.Collection)
    • class java.util.AbstractList (implements java.util.List)
      • class gov.usda.gdpc.AlleleList (implements java.util.List)
  • class gov.usda.gdpc.database.AbstractDatabaseMapping (implements gov.usda.gdpc.database.DatabaseMapping)
    • class gov.usda.gdpc.database.ConstantDatabaseMapping
    • class gov.usda.gdpc.database.MultiDatabaseMapping
    • class gov.usda.gdpc.database.NullDatabaseMapping
    • class gov.usda.gdpc.panzea.PanzeaPositionMinutesDatabaseMapping
    • class gov.usda.gdpc.database.SimpleDatabaseMapping
      • class gov.usda.gdpc.database.DateDatabaseMapping
      • class gov.usda.gdpc.panzea.PanzeaGenotypeExperimentDatabaseMapping
      • class gov.usda.gdpc.panzea.PanzeaLocusTypeDatabaseMapping
      • class gov.usda.gdpc.database.StringDatabaseMapping
        • class gov.usda.gdpc.panzea.PanzeaLocalityDatabaseMapping
        • class gov.usda.gdpc.panzea.PanzeaLocusDatabaseMapping
        • class gov.usda.gdpc.panzea.PanzeaOntologyDatabaseMapping
  • class gov.usda.gdpc.database.AbstractDatabaseMappingIndex (implements gov.usda.gdpc.database.DatabaseMappingIndex)
    • class gov.usda.gdpc.database.DefaultDatabaseMappingIndex
  • class gov.usda.gdpc.AbstractDBConnection (implements gov.usda.gdpc.DBConnection)
    • class gov.usda.gdpc.database.AbstractJDBCConnection (implements gov.usda.gdpc.DBConnection)
      • class gov.usda.gdpc.panzea.PanzeaDBConnection
        • class gov.usda.gdpc.gramene.GrameneConnection
  • class gov.usda.gdpc.AbstractDBElement (implements gov.usda.gdpc.DBElement)
    • class gov.usda.gdpc.EnvironmentExperiment
    • class gov.usda.gdpc.Genotype
    • class gov.usda.gdpc.GenotypeExperiment
    • class gov.usda.gdpc.Locality
    • class gov.usda.gdpc.Locus
    • class gov.usda.gdpc.Phenotype
    • class gov.usda.gdpc.PhenotypeOntology
    • class gov.usda.gdpc.Taxon
  • class gov.usda.gdpc.AbstractDBGateway (implements gov.usda.gdpc.DBGateway)
    • class gov.usda.gdpc.DefaultDBGateway
  • class gov.usda.gdpc.AbstractFilter (implements gov.usda.gdpc.Filter)
    • class gov.usda.gdpc.EnvironmentExperimentFilter
    • class gov.usda.gdpc.GenotypeExperimentFilter
    • class gov.usda.gdpc.GenotypeFilter
    • class gov.usda.gdpc.LocalityFilter
    • class gov.usda.gdpc.LocusFilter
    • class gov.usda.gdpc.PhenotypeFilter
    • class gov.usda.gdpc.PhenotypeOntologyFilter
    • class gov.usda.gdpc.TaxonFilter
  • class gov.usda.gdpc.AbstractFilterValue (implements gov.usda.gdpc.FilterValue)
    • class gov.usda.gdpc.FilterLikeValue
    • class gov.usda.gdpc.FilterRangeValue
    • class gov.usda.gdpc.FilterSingleValue
  • class gov.usda.gdpc.AbstractGroup (implements gov.usda.gdpc.Group)
    • class gov.usda.gdpc.AbstractDBElementGroup (implements gov.usda.gdpc.DBElementGroup)
      • class gov.usda.gdpc.AbstractEnvironmentExperimentGroup (implements gov.usda.gdpc.EnvironmentExperimentGroup)
        • class gov.usda.gdpc.DefaultEnvironmentExperimentGroup
      • class gov.usda.gdpc.AbstractGenotypeExperimentGroup (implements gov.usda.gdpc.GenotypeExperimentGroup)
        • class gov.usda.gdpc.DefaultGenotypeExperimentGroup
      • class gov.usda.gdpc.AbstractGenotypeGroup (implements gov.usda.gdpc.GenotypeGroup)
        • class gov.usda.gdpc.DefaultGenotypeGroup
      • class gov.usda.gdpc.AbstractLocalityGroup (implements gov.usda.gdpc.LocalityGroup)
        • class gov.usda.gdpc.DefaultLocalityGroup
      • class gov.usda.gdpc.AbstractLocusGroup (implements gov.usda.gdpc.LocusGroup)
        • class gov.usda.gdpc.Chromosome
        • class gov.usda.gdpc.DefaultLocusGroup
      • class gov.usda.gdpc.AbstractPhenotypeGroup (implements gov.usda.gdpc.PhenotypeGroup)
        • class gov.usda.gdpc.DefaultPhenotypeGroup
      • class gov.usda.gdpc.AbstractPhenotypeOntologyGroup (implements gov.usda.gdpc.PhenotypeOntologyGroup)
        • class gov.usda.gdpc.DefaultPhenotypeOntologyGroup
      • class gov.usda.gdpc.AbstractTaxonGroup (implements gov.usda.gdpc.TaxonGroup)
        • class gov.usda.gdpc.DefaultTaxonGroup
  • class javax.swing.AbstractListModel (implements javax.swing.ListModel, java.io.Serializable)
    • class gov.usda.gdpc.browser.TableRowHeaderListModel
  • class gov.usda.gdpc.AbstractProperty (implements gov.usda.gdpc.Property)
    • class gov.usda.gdpc.EnvironmentExperimentProperty
    • class gov.usda.gdpc.GenotypeExperimentProperty
    • class gov.usda.gdpc.GenotypeProperty
    • class gov.usda.gdpc.LocalityProperty
    • class gov.usda.gdpc.LocusProperty
    • class gov.usda.gdpc.PhenotypeOntologyProperty
    • class gov.usda.gdpc.PhenotypeProperty
    • class gov.usda.gdpc.TaxonProperty
  • class gov.usda.gdpc.database.AbstractPropertyMap (implements gov.usda.gdpc.database.PropertyMap)
    • class gov.usda.gdpc.panzea.PanzeaPropertyMap
  • class gov.usda.gdpc.util.AbstractTable (implements gov.usda.gdpc.util.Table)
    • class gov.usda.gdpc.util.EmptyTable
    • class gov.usda.gdpc.GenotypeTable
    • class gov.usda.gdpc.PhenotypeTable
  • class javax.swing.table.AbstractTableModel (implements java.io.Serializable, javax.swing.table.TableModel)
    • class gov.usda.gdpc.browser.GenericPropTableModel
    • class gov.usda.gdpc.browser.MatrixTableModel
    • class gov.usda.gdpc.browser.PropertiesTableModel
  • class gov.usda.gdpc.xml.AbstractXMLDocument (implements gov.usda.gdpc.xml.XMLDocument)
    • class gov.usda.gdpc.xml.XMLDBElementGroup (implements gov.usda.gdpc.xml.XMLDocument)
    • class gov.usda.gdpc.xml.XMLGenericTable (implements gov.usda.gdpc.xml.XMLDocument)
  • class gov.usda.gdpc.util.ArrayUtils
  • class java.util.Calendar (implements java.lang.Cloneable, java.io.Serializable)
    • class java.util.GregorianCalendar
      • class gov.usda.gdpc.util.Calendar (implements java.lang.Comparable)
  • class gov.usda.gdpc.browser.ColumnData
  • class java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    • class java.awt.Container
      • class javax.swing.JComponent (implements java.io.Serializable)
        • class javax.swing.AbstractButton (implements java.awt.ItemSelectable, javax.swing.SwingConstants)
          • class javax.swing.JMenuItem (implements javax.accessibility.Accessible, javax.swing.MenuElement)
            • class javax.swing.JMenu (implements javax.accessibility.Accessible, javax.swing.MenuElement)
              • class gov.usda.gdpc.browser.ConnectionsMenu
              • class gov.usda.gdpc.browser.FileMenu
              • class gov.usda.gdpc.browser.HelpMenu
              • class gov.usda.gdpc.browser.ViewMenu
          • class javax.swing.JToggleButton (implements javax.accessibility.Accessible)
            • class javax.swing.JCheckBox (implements javax.accessibility.Accessible)
              • class gov.usda.gdpc.browser.PropertyCheckBox (implements java.awt.event.ItemListener)
        • class javax.swing.JList (implements javax.accessibility.Accessible, javax.swing.Scrollable)
          • class gov.usda.gdpc.gui.GenericList
        • class javax.swing.JPanel (implements javax.accessibility.Accessible)
          • class gov.usda.gdpc.browser.DBConnectionsPanel
          • class gov.usda.gdpc.browser.DBElementPanel (implements javax.swing.event.TreeModelListener)
          • class gov.usda.gdpc.browser.FilterValuesPanel (implements java.lang.Runnable)
          • class gov.usda.gdpc.gui.LabeledList
            • class gov.usda.gdpc.browser.PropertyLabeledList
        • class javax.swing.JTable (implements javax.accessibility.Accessible, javax.swing.event.CellEditorListener, javax.swing.event.ListSelectionListener, javax.swing.Scrollable, javax.swing.event.TableColumnModelListener, javax.swing.event.TableModelListener)
          • class gov.usda.gdpc.browser.DBConnectionProperties (implements gov.usda.gdpc.browser.Properties)
          • class gov.usda.gdpc.browser.DBElementProperties (implements gov.usda.gdpc.browser.Properties)
        • class javax.swing.text.JTextComponent (implements javax.accessibility.Accessible, javax.swing.Scrollable)
          • class javax.swing.JTextField (implements javax.swing.SwingConstants)
            • class gov.usda.gdpc.gui.FixedTextField
        • class javax.swing.JTree (implements javax.accessibility.Accessible, javax.swing.Scrollable)
          • class gov.usda.gdpc.gui.DBElementTree
      • class java.awt.Window (implements javax.accessibility.Accessible)
        • class java.awt.Frame (implements java.awt.MenuContainer)
          • class javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • class gov.usda.gdpc.browser.Browser (implements java.lang.Runnable)
  • class java.awt.event.ComponentAdapter (implements java.awt.event.ComponentListener)
    • class gov.usda.gdpc.browser.DistinctComponentAdapter
  • class gov.usda.gdpc.Convert
  • class gov.usda.gdpc.axis.DBConnectionProxy (implements gov.usda.gdpc.DBConnection)
  • class gov.usda.gdpc.gui.dbetree.DBElementTreeModel (implements javax.swing.tree.TreeModel)
  • class org.xml.sax.helpers.DefaultHandler (implements org.xml.sax.ContentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
    • class org.apache.axis.message.SOAPHandler
      • class org.apache.axis.encoding.DeserializerImpl (implements org.apache.axis.encoding.Callback, javax.xml.rpc.encoding.Deserializer, org.apache.axis.encoding.Deserializer)
        • class gov.usda.gdpc.axis.AlleleListDeserializer
        • class gov.usda.gdpc.axis.DBElementDeserializer
        • class gov.usda.gdpc.axis.DBElementsDeserializer
        • class gov.usda.gdpc.axis.DistinctDBElementDeserializer
        • class gov.usda.gdpc.axis.DistinctValueDeserializer
        • class gov.usda.gdpc.axis.FilterDeserializer
        • class gov.usda.gdpc.axis.GenericTableDeserializer
        • class gov.usda.gdpc.axis.GenericTableItemDeserializer
        • class gov.usda.gdpc.axis.GenericTableRowDeserializer
        • class gov.usda.gdpc.axis.GroupDeserializer
        • class gov.usda.gdpc.axis.IdentifierDeserializer
        • class gov.usda.gdpc.axis.LikeValueDeserializer
        • class gov.usda.gdpc.axis.PropertiesDeserializer
        • class gov.usda.gdpc.axis.PropertiesListDeserializer
        • class gov.usda.gdpc.axis.RangeValueDeserializer
        • class org.apache.axis.encoding.ser.SimpleDeserializer
          • class gov.usda.gdpc.axis.StringToObjectDeserializer
        • class gov.usda.gdpc.axis.SingleValueDeserializer
  • class gov.usda.gdpc.DistinctPropertyValues
  • class gov.usda.gdpc.axis.DistinctValueDeserializerFactory (implements org.apache.axis.encoding.DeserializerFactory)
  • class gov.usda.gdpc.axis.DistinctValueSerializer (implements org.apache.axis.encoding.Serializer)
  • class gov.usda.gdpc.axis.DistinctValueSerializerFactory (implements org.apache.axis.encoding.SerializerFactory)
  • class gov.usda.gdpc.util.ExceptionUtils
  • class gov.usda.gdpc.Export
  • class gov.usda.gdpc.database.ExtraInfo
  • class javax.swing.filechooser.FileFilter
    • class gov.usda.gdpc.browser.FileFilter
  • class gov.usda.gdpc.axis.FilterDeserializerFactory (implements org.apache.axis.encoding.DeserializerFactory)
  • class gov.usda.gdpc.axis.FilterSerializer (implements org.apache.axis.encoding.Serializer)
  • class gov.usda.gdpc.axis.FilterSerializerFactory (implements org.apache.axis.encoding.SerializerFactory)
  • class gov.usda.gdpc.FilterValueType
  • class gov.usda.gdpc.xml.GDPCConstants
  • class gov.usda.gdpc.axis.GDPCDeserializerFactory (implements org.apache.axis.encoding.DeserializerFactory)
  • class gov.usda.gdpc.axis.GDPCSerializer (implements org.apache.axis.encoding.Serializer)
  • class gov.usda.gdpc.axis.GDPCSerializerFactory (implements org.apache.axis.encoding.SerializerFactory)
  • class gov.usda.gdpc.axis.GDPCSerializerUtil
  • class gov.usda.gdpc.xml.GDPCTag
  • class gov.usda.gdpc.browser.GenericPropTableData
  • class gov.usda.gdpc.util.GenericTable (implements gov.usda.gdpc.util.Table)
  • class gov.usda.gdpc.axis.GenericTableDeserializerFactory (implements org.apache.axis.encoding.DeserializerFactory)
  • class gov.usda.gdpc.axis.GenericTableSerializer (implements org.apache.axis.encoding.Serializer)
  • class gov.usda.gdpc.axis.GenericTableSerializerFactory (implements org.apache.axis.encoding.SerializerFactory)
  • class gov.usda.gdpc.gui.dbetree.HeadNode (implements gov.usda.gdpc.gui.dbetree.Node)
  • class gov.usda.gdpc.Identifier (implements java.lang.Comparable)
  • class gov.usda.gdpc.browser.ListSelectionListener (implements javax.swing.event.ListSelectionListener)
  • class gov.usda.gdpc.pal.PALUtil
  • class gov.usda.gdpc.panzea.PanzeaCache (implements java.lang.Runnable)
  • class gov.usda.gdpc.PrintProperties
  • class gov.usda.gdpc.axis.PropertiesListDeserializerFactory (implements org.apache.axis.encoding.DeserializerFactory)
  • class gov.usda.gdpc.axis.PropertiesListSerializer (implements org.apache.axis.encoding.Serializer)
  • class gov.usda.gdpc.axis.PropertiesListSerializerFactory (implements org.apache.axis.encoding.SerializerFactory)
  • class gov.usda.gdpc.browser.PropertiesTableData
  • class gov.usda.gdpc.browser.PropertyCheckBoxListener (implements java.awt.event.ItemListener)
  • class gov.usda.gdpc.gui.dbetree.PropertyNode (implements gov.usda.gdpc.gui.dbetree.Node)
  • class gov.usda.gdpc.xml.PropertyTag
  • class gov.usda.gdpc.util.ReadOnlyCollection (implements java.util.Collection)
  • class gov.usda.gdpc.util.ReadOnlyIterator (implements java.util.Iterator)
  • class gov.usda.gdpc.util.ReadOnlyList (implements java.util.List)
  • class gov.usda.gdpc.util.ReadOnlySet (implements java.util.Set)
  • class gov.usda.gdpc.util.SortedList (implements java.util.List)
  • class gov.usda.gdpc.database.SQLStatements
  • class gov.usda.gdpc.axis.Test1Client
  • class gov.usda.gdpc.axis.TestClient
  • class gov.usda.gdpc.xml.TestValid
  • class gov.usda.gdpc.browser.TreeSelectionListener (implements javax.swing.event.TreeSelectionListener)
  • class gov.usda.gdpc.util.TreeSetPlusNull (implements java.util.Set)
  • class gov.usda.gdpc.browser.Util
  • class gov.usda.gdpc.util.Utils
  • class gov.usda.gdpc.gui.dbetree.ValueNode (implements gov.usda.gdpc.gui.dbetree.Node)
  • class java.awt.event.WindowAdapter (implements java.awt.event.WindowFocusListener, java.awt.event.WindowListener, java.awt.event.WindowStateListener)
    • class gov.usda.gdpc.browser.BasicWindowMonitor

Interface Hierarchy

• interface java.util.Collection
  • interface gov.usda.gdpc.DBElementGroup
    • interface gov.usda.gdpc.EnvironmentExperimentGroup
    • interface gov.usda.gdpc.GenotypeExperimentGroup
    • interface gov.usda.gdpc.GenotypeGroup
    • interface gov.usda.gdpc.LocalityGroup
    • interface gov.usda.gdpc.LocusGroup
    • interface gov.usda.gdpc.PhenotypeGroup
    • interface gov.usda.gdpc.PhenotypeOntologyGroup
    • interface gov.usda.gdpc.TaxonGroup
  • interface gov.usda.gdpc.EnvironmentExperimentGroup
  • interface gov.usda.gdpc.GenotypeExperimentGroup
  • interface gov.usda.gdpc.GenotypeGroup
  • interface gov.usda.gdpc.Group
    • interface gov.usda.gdpc.DBElementGroup
      • interface gov.usda.gdpc.EnvironmentExperimentGroup
      • interface gov.usda.gdpc.GenotypeExperimentGroup
      • interface gov.usda.gdpc.GenotypeGroup
      • interface gov.usda.gdpc.LocalityGroup
      • interface gov.usda.gdpc.LocusGroup
      • interface gov.usda.gdpc.PhenotypeGroup
      • interface gov.usda.gdpc.PhenotypeOntologyGroup
      • interface gov.usda.gdpc.TaxonGroup
    • interface gov.usda.gdpc.EnvironmentExperimentGroup
    • interface gov.usda.gdpc.GenotypeExperimentGroup
    • interface gov.usda.gdpc.GenotypeGroup
    • interface gov.usda.gdpc.LocalityGroup
    • interface gov.usda.gdpc.LocusGroup
    • interface gov.usda.gdpc.PhenotypeGroup
    • interface gov.usda.gdpc.PhenotypeOntologyGroup
    • interface gov.usda.gdpc.TaxonGroup
  • interface java.util.List
    • interface gov.usda.gdpc.DBElementGroup
      • interface gov.usda.gdpc.EnvironmentExperimentGroup
      • interface gov.usda.gdpc.GenotypeExperimentGroup
      • interface gov.usda.gdpc.GenotypeGroup
      • interface gov.usda.gdpc.LocalityGroup
      • interface gov.usda.gdpc.LocusGroup
      • interface gov.usda.gdpc.PhenotypeGroup
      • interface gov.usda.gdpc.PhenotypeOntologyGroup
      • interface gov.usda.gdpc.TaxonGroup
    • interface gov.usda.gdpc.EnvironmentExperimentGroup
    • interface gov.usda.gdpc.GenotypeExperimentGroup
    • interface gov.usda.gdpc.GenotypeGroup
    • interface gov.usda.gdpc.Group
      • interface gov.usda.gdpc.DBElementGroup
        • interface gov.usda.gdpc.EnvironmentExperimentGroup
        • interface gov.usda.gdpc.GenotypeExperimentGroup
        • interface gov.usda.gdpc.GenotypeGroup
        • interface gov.usda.gdpc.LocalityGroup
        • interface gov.usda.gdpc.LocusGroup
        • interface gov.usda.gdpc.PhenotypeGroup
        • interface gov.usda.gdpc.PhenotypeOntologyGroup
        • interface gov.usda.gdpc.TaxonGroup
      • interface gov.usda.gdpc.EnvironmentExperimentGroup
      • interface gov.usda.gdpc.GenotypeExperimentGroup
      • interface gov.usda.gdpc.GenotypeGroup
      • interface gov.usda.gdpc.LocalityGroup
      • interface gov.usda.gdpc.LocusGroup
      • interface gov.usda.gdpc.PhenotypeGroup
      • interface gov.usda.gdpc.PhenotypeOntologyGroup
      • interface gov.usda.gdpc.TaxonGroup
    • interface gov.usda.gdpc.LocalityGroup
    • interface gov.usda.gdpc.LocusGroup
    • interface gov.usda.gdpc.PhenotypeGroup
    • interface gov.usda.gdpc.PhenotypeOntologyGroup
    • interface gov.usda.gdpc.TaxonGroup
  • interface gov.usda.gdpc.LocalityGroup
  • interface gov.usda.gdpc.LocusGroup
  • interface gov.usda.gdpc.PhenotypeGroup
  • interface gov.usda.gdpc.PhenotypeOntologyGroup
  • interface gov.usda.gdpc.TaxonGroup
• interface java.lang.Comparable
  • interface gov.usda.gdpc.DBElement (also extends java.util.Map)
  • interface gov.usda.gdpc.Property
• interface gov.usda.gdpc.database.DatabaseMapping
• interface gov.usda.gdpc.database.DatabaseMappingIndex
• interface gov.usda.gdpc.DBConnection
• interface gov.usda.gdpc.DBGateway
• interface gov.usda.gdpc.Filter
• interface gov.usda.gdpc.FilterValue
• interface java.util.Map
  • interface gov.usda.gdpc.DBElement (also extends java.lang.Comparable)
• interface gov.usda.gdpc.gui.dbetree.Node
• interface gov.usda.gdpc.browser.Properties
• interface gov.usda.gdpc.database.PropertyMap
• interface gov.usda.gdpc.util.Table
• interface gov.usda.gdpc.xml.XMLDocument