# Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'cdv_allele_curated_allele' # CREATE TABLE `cdv_allele_curated_allele` ( `cdv_allele_curated_allele_id` bigint(20) NOT NULL auto_increment, `cdv_curated_allele_id` bigint(20) default NULL, `div_allele_id` bigint(20) default NULL, `cdv_curation_id` bigint(20) default NULL, PRIMARY KEY (`cdv_allele_curated_allele_id`), KEY `cdv_allele_curated_allele_id` (`cdv_allele_curated_allele_id`), KEY `cdv_curated_allele_id` (`cdv_curated_allele_id`), KEY `cdv_curation_id` (`cdv_curation_id`), KEY `div_allele_id` (`div_allele_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'cdv_curated_allele' # CREATE TABLE `cdv_curated_allele` ( `cdv_curated_allele_id` bigint(20) NOT NULL auto_increment, `name` varchar(50) default NULL, PRIMARY KEY (`cdv_curated_allele_id`), KEY `cdv_curated_allele_id` (`cdv_curated_allele_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'cdv_curation' # CREATE TABLE `cdv_curation` ( `cdv_curation_id` bigint(20) NOT NULL auto_increment, `cdv_reason_id` bigint(20) default NULL, `curator` varchar(50) default NULL, `curation_date` datetime default NULL, `comments` varchar(50) default NULL, PRIMARY KEY (`cdv_curation_id`), KEY `cdv_curation_id` (`cdv_curation_id`), KEY `cdv_reason_id` (`cdv_reason_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'cdv_map_feature' # CREATE TABLE `cdv_map_feature` ( `cdv_map_feature_id` bigint(20) NOT NULL auto_increment, `chromosome_number` bigint(20) default NULL, `comments` varchar(50) default NULL, `genetic_bin` varchar(50) default NULL, `xref_map_id` varchar(50) default NULL, `genetic_map` varchar(50) default NULL, `genetic_position` double default NULL, `locus_type` varchar(50) default NULL, `name` varchar(50) default NULL, `physical_position` double default NULL, PRIMARY KEY (`cdv_map_feature_id`), KEY `locusID` (`cdv_map_feature_id`), KEY `xref_map_id` (`xref_map_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'cdv_marker' # CREATE TABLE `cdv_marker` ( `cdv_marker_id` bigint(20) NOT NULL auto_increment, `cdv_map_feature_id` bigint(20) default NULL, `name` varchar(50) default NULL, `ref_seq` varchar(50) default NULL, `div_ref_stock_id` bigint(20) default NULL, `marker_aid` varchar(50) default NULL, PRIMARY KEY (`cdv_marker_id`), KEY `diversity_locus_id` (`cdv_map_feature_id`), KEY `diversity_maker_id` (`cdv_marker_id`), KEY `marker_aid` (`marker_aid`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'cdv_passport_group' # CREATE TABLE `cdv_passport_group` ( `cdv_passport_group_id` bigint(20) NOT NULL auto_increment, `group_name` varchar(50) default NULL, PRIMARY KEY (`cdv_passport_group_id`), KEY `div_passport_group_id` (`cdv_passport_group_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'cdv_passport_set' # CREATE TABLE `cdv_passport_set` ( `cdv_passport_set_id` bigint(20) NOT NULL auto_increment, `div_passport_id` bigint(20) default NULL, `cdv_passport_group_id` bigint(20) default NULL, PRIMARY KEY (`cdv_passport_set_id`), KEY `div_passport_group_id` (`cdv_passport_group_id`), KEY `div_passport_set_id` (`cdv_passport_set_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'cdv_reason' # CREATE TABLE `cdv_reason` ( `cdv_reason_id` bigint(20) NOT NULL auto_increment, `description` varchar(50) default NULL, PRIMARY KEY (`cdv_reason_id`), KEY `cdv_reason_id` (`cdv_reason_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_aa_annotation' # CREATE TABLE `div_aa_annotation` ( `div_aa_annotation_id` bigint(20) NOT NULL auto_increment, `div_annotation_type_id` bigint(20) default NULL, `div_allele_assay_id` bigint(20) default NULL, `annotation_value` text, PRIMARY KEY (`div_aa_annotation_id`), KEY `div_aa_annotationdiv_annotation_type_id` (`div_annotation_type_id`), KEY `genotypeExpAnnotationID` (`div_aa_annotation_id`), KEY `genotypeExpID` (`div_allele_assay_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_accession_collecting' # CREATE TABLE `div_accession_collecting` ( `div_accession_collecting_id` bigint(20) NOT NULL auto_increment, `div_locality_id` bigint(20) default NULL, `collector` varchar(50) default NULL, `collnumb` varchar(50) default NULL, `collsrc` varchar(50) default NULL, `collcode` varchar(50) default NULL, PRIMARY KEY (`div_accession_collecting_id`), KEY `collcode` (`collcode`), KEY `div_accession_collecting_id` (`div_accession_collecting_id`), KEY `div_locality_id` (`div_locality_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_allele' # CREATE TABLE `div_allele` ( `div_allele_id` bigint(20) NOT NULL auto_increment, `div_obs_unit_sample_id` bigint(20) default NULL, `div_allele_assay_id` bigint(20) default NULL, `allele_num` bigint(20) default NULL, `quality` text, `value` text, `proportion` bigint(20) default NULL, `total_n` bigint(20) default NULL, PRIMARY KEY (`div_allele_id`), KEY `allele_num` (`allele_num`), KEY `div_allele_assay_id` (`div_allele_assay_id`), KEY `div_stock_sample_id` (`div_obs_unit_sample_id`), KEY `genotypeID` (`div_allele_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_allele_assay' # CREATE TABLE `div_allele_assay` ( `div_allele_assay_id` bigint(20) NOT NULL auto_increment, `div_source_assay_id` bigint(20) default NULL, `div_poly_type_id` bigint(20) default NULL, `cdv_marker_id` bigint(20) default NULL, `comments` varchar(50) default NULL, `assay_date` datetime default NULL, `name` varchar(50) default NULL, `producer` varchar(50) default NULL, `position` varchar(50) default NULL, `ref_seq` varchar(50) default NULL, `div_ref_stock_id` bigint(20) default NULL, `length` bigint(20) default NULL, PRIMARY KEY (`div_allele_assay_id`), KEY `div_marker_id` (`cdv_marker_id`), KEY `div_poly_type_id` (`div_poly_type_id`), KEY `div_ref_stock_id` (`div_ref_stock_id`), KEY `div_source_assay_id` (`div_source_assay_id`), KEY `genotypeExpID` (`div_allele_assay_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_annotation_type' # CREATE TABLE `div_annotation_type` ( `div_annotation_type_id` bigint(20) NOT NULL auto_increment, `anno_type` varchar(50) default NULL, PRIMARY KEY (`div_annotation_type_id`), KEY `annotationTypeID` (`div_annotation_type_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_experiment' # CREATE TABLE `div_experiment` ( `div_experiment_id` bigint(20) NOT NULL auto_increment, `name` varchar(50) default NULL, `design` varchar(50) default NULL, `originator` varchar(50) default NULL, `comments` varchar(50) default NULL, PRIMARY KEY (`div_experiment_id`), KEY `phenotype_exp_id` (`div_experiment_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_generation' # CREATE TABLE `div_generation` ( `div_generation_id` bigint(20) NOT NULL auto_increment, `value` varchar(50) default NULL, `remarks` varchar(50) default NULL, `icis_id` varchar(50) default NULL, PRIMARY KEY (`div_generation_id`), KEY `div_generation_id` (`div_generation_id`), KEY `icis_id` (`icis_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_locality' # CREATE TABLE `div_locality` ( `div_locality_id` bigint(20) NOT NULL auto_increment, `elevation` bigint(20) default NULL, `city` varchar(50) default NULL, `country` varchar(50) default NULL, `origcty` varchar(50) default NULL, `latitude` double default NULL, `longitude` double default NULL, `locality_name` varchar(50) default NULL, `state_province` varchar(50) default NULL, PRIMARY KEY (`div_locality_id`), KEY `localityID` (`div_locality_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_obs_unit' # CREATE TABLE `div_obs_unit` ( `div_obs_unit_id` bigint(20) NOT NULL auto_increment, `div_experiment_id` bigint(20) default NULL, `div_stock_id` bigint(20) default NULL, `div_locality_id` bigint(20) default NULL, `name` varchar(50) default NULL, `coord_x` bigint(20) default NULL, `coord_y` bigint(20) default NULL, `rep` varchar(50) default NULL, `block` varchar(50) default NULL, `plot` varchar(50) default NULL, `plant` varchar(50) default NULL, `planting_date` datetime default NULL, `harvest_date` datetime default NULL, `summary` varchar(255) default NULL, PRIMARY KEY (`div_obs_unit_id`), KEY `div_experiment_id` (`div_experiment_id`), KEY `div_stock_id` (`div_stock_id`), KEY `locality_id` (`div_locality_id`), KEY `obs_unit_id` (`div_obs_unit_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_obs_unit_sample' # CREATE TABLE `div_obs_unit_sample` ( `div_obs_unit_sample_id` bigint(20) NOT NULL auto_increment, `div_obs_unit_id` bigint(20) default NULL, `sample_date` datetime default NULL, `name` varchar(50) default NULL, `producer` varchar(50) default NULL, `comments` varchar(50) default NULL, PRIMARY KEY (`div_obs_unit_sample_id`), KEY `div_obsunit_id` (`div_obs_unit_id`), KEY `div_stock_sample_id` (`div_obs_unit_sample_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_passport' # CREATE TABLE `div_passport` ( `div_passport_id` bigint(20) NOT NULL auto_increment, `div_taxonomy_id` bigint(20) default NULL, `div_accession_collecting_id` bigint(20) default NULL, `accename` varchar(50) default NULL, `remarks` varchar(50) default NULL, `germplasm_type` varchar(50) default NULL, `source` varchar(50) default NULL, `accenumb` varchar(50) default NULL, `sampstat` varchar(50) default NULL, PRIMARY KEY (`div_passport_id`), KEY `div_accession_collecting_id` (`div_accession_collecting_id`), KEY `div_taxonomy_id` (`div_taxonomy_id`), KEY `passportID` (`div_passport_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_poly_type' # CREATE TABLE `div_poly_type` ( `div_poly_type_id` bigint(20) NOT NULL auto_increment, `poly_type` varchar(50) default NULL, PRIMARY KEY (`div_poly_type_id`), KEY `div_poly_type_id` (`div_poly_type_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_statistic_type' # CREATE TABLE `div_statistic_type` ( `div_statistic_type_id` bigint(20) NOT NULL auto_increment, `stat_type` varchar(50) default NULL, PRIMARY KEY (`div_statistic_type_id`), KEY `div_statistic_type_id` (`div_statistic_type_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_stock' # CREATE TABLE `div_stock` ( `div_stock_id` bigint(20) NOT NULL auto_increment, `div_generation_id` bigint(20) default NULL, `div_passport_id` bigint(20) default NULL, `seed_lot` varchar(50) default NULL, `stock_source` varchar(50) default NULL, `remarks` varchar(50) default NULL, PRIMARY KEY (`div_stock_id`), KEY `div_generation_id` (`div_generation_id`), KEY `div_passport_id` (`div_passport_id`), KEY `div_stock_id` (`div_stock_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_stock_parent' # CREATE TABLE `div_stock_parent` ( `div_stock_parent_id` bigint(20) NOT NULL auto_increment, `div_stock_id` bigint(20) default NULL, `div_parent_id` bigint(20) default NULL, `recurrent` tinyint(4) default NULL, `role` varchar(50) default NULL, PRIMARY KEY (`div_stock_parent_id`), KEY `parentID` (`div_parent_id`), KEY `stockID` (`div_stock_id`), KEY `stockParentID` (`div_stock_parent_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_synonym' # CREATE TABLE `div_synonym` ( `div_synonym_id` bigint(20) NOT NULL auto_increment, `div_passport_id` bigint(20) default NULL, `synonym` varchar(50) default NULL, `remarks` varchar(50) default NULL, PRIMARY KEY (`div_synonym_id`), KEY `div_passport_id` (`div_passport_id`), KEY `div_synonym_id` (`div_synonym_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_taxonomy' # CREATE TABLE `div_taxonomy` ( `div_taxonomy_id` bigint(20) NOT NULL auto_increment, `genus` varchar(50) default NULL, `species` varchar(50) default NULL, `subspecies` varchar(50) default NULL, `subtaxa` varchar(50) default NULL, `race` varchar(50) default NULL, `population` varchar(50) default NULL, PRIMARY KEY (`div_taxonomy_id`), KEY `div_taxonomy_id` (`div_taxonomy_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_trait' # CREATE TABLE `div_trait` ( `div_trait_id` bigint(20) NOT NULL auto_increment, `div_trait_uom_id` bigint(20) default NULL, `div_statistic_type_id` bigint(20) default NULL, `div_obs_unit_id` bigint(20) default NULL, `date_measured` datetime default NULL, `value` varchar(50) default NULL, PRIMARY KEY (`div_trait_id`), KEY `div_obsunit_id` (`div_obs_unit_id`), KEY `div_statistic_type_id` (`div_statistic_type_id`), KEY `div_trait_uom_id` (`div_trait_uom_id`), KEY `phenotypeID` (`div_trait_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_trait_uom' # CREATE TABLE `div_trait_uom` ( `div_trait_uom_id` bigint(20) NOT NULL auto_increment, `to_accession` bigint(20) default NULL, `div_unit_of_measure_id` bigint(20) default NULL, `local_trait_name` varchar(50) default NULL, `trait_protocol` varchar(50) default NULL, PRIMARY KEY (`div_trait_uom_id`), KEY `div_trait_uom_id` (`div_trait_uom_id`), KEY `div_unit_of_measure_id` (`div_unit_of_measure_id`), KEY `qtl_trait_ontology_id` (`to_accession`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_treatment' # CREATE TABLE `div_treatment` ( `div_treatment_id` bigint(20) NOT NULL auto_increment, `div_treatment_uom_id` bigint(20) default NULL, `div_obs_unit_id` bigint(20) default NULL, `value` varchar(50) default NULL, PRIMARY KEY (`div_treatment_id`), KEY `div_entry_treatment_id` (`div_treatment_id`), KEY `div_obsunit_id` (`div_obs_unit_id`), KEY `div_treatment_uom_id` (`div_treatment_uom_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_treatment_uom' # CREATE TABLE `div_treatment_uom` ( `div_treatment_uom_id` bigint(20) NOT NULL auto_increment, `eo_accession` bigint(20) default NULL, `div_unit_of_measure_id` bigint(20) default NULL, `local_treatment_name` varchar(50) default NULL, `treatment_protocol` varchar(50) default NULL, PRIMARY KEY (`div_treatment_uom_id`), KEY `div_treatment_id` (`eo_accession`), KEY `div_treatment_uom_id` (`div_treatment_uom_id`), KEY `div_unit_of_measure_id` (`div_unit_of_measure_id`) ) TYPE=InnoDB; # Host: 192.168.0.3 # Database: gdpdm_20040824 # Table: 'div_unit_of_measure' # CREATE TABLE `div_unit_of_measure` ( `div_unit_of_measure_id` bigint(20) NOT NULL auto_increment, `unit_type` varchar(50) default NULL, PRIMARY KEY (`div_unit_of_measure_id`), KEY `div_unit_of_measure_id` (`div_unit_of_measure_id`) ) TYPE=InnoDB;